Category: q-bio.NC
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Metabolic cost of information processing in Poisson variational autoencoders
Metabolic cost of information processing in Poisson variational autoencoders arXiv:2602.13421v1 Announce Type: new Abstract: Computation in biological systems is fundamentally energy-constrained, yet standard theories of computation treat energy as freely available. Here, we argue that variational free energy minimization under a Poisson assumption offers a principled path toward an energy-aware theory of computation. Our key…
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A Hitchhiker’s Guide to Poisson Gradient Estimation
A Hitchhiker’s Guide to Poisson Gradient Estimation arXiv:2602.03896v1 Announce Type: new Abstract: Poisson-distributed latent variable models are widely used in computational neuroscience, but differentiating through discrete stochastic samples remains challenging. Two approaches address this: Exponential Arrival Time (EAT) simulation and Gumbel-SoftMax (GSM) relaxation. We provide the first systematic comparison of these methods, along with practical…
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Proof of a perfect platonic representation hypothesis
Proof of a perfect platonic representation hypothesis arXiv:2507.01098v1 Announce Type: cross Abstract: In this note, we elaborate on and explain in detail the proof given by Ziyin et al. (2025) of the “perfect” Platonic Representation Hypothesis (PRH) for the embedded deep linear network model (EDLN). We show that if trained with SGD, two EDLNs with…
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Communities in the Kuramoto Model: Dynamics and Detection via Path Signatures
Communities in the Kuramoto Model: Dynamics and Detection via Path Signatures arXiv:2503.17546v1 Announce Type: new Abstract: The behavior of multivariate dynamical processes is often governed by underlying structural connections that relate the components of the system. For example, brain activity which is often measured via time series is determined by an underlying structural graph, where…
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Fast Multi-Group Gaussian Process Factor Models
Fast Multi-Group Gaussian Process Factor Models arXiv:2412.16773v1 Announce Type: new Abstract: Gaussian processes are now commonly used in dimensionality reduction approaches tailored to neuroscience, especially to describe changes in high-dimensional neural activity over time. As recording capabilities expand to include neuronal populations across multiple brain areas, cortical layers, and cell types, interest in extending Gaussian…